BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029B11SP1|AL429024
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1731 0.0
>3x_Contig1682
Length = 16889
Score = 1731 bits (871), Expect = 0.0
Identities = 881/885 (99%), Gaps = 1/885 (0%)
Strand = Plus / Plus
Query: 1 aatcaggaatttcgacatgagaaaccaaaaaaagaaggtggaactgtcggtttttgctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8581 aatcaggaatttcgacatgagaaaccaaaaaaagaaggtggaactgtcggtttttgctat 8640
Query: 61 gcctcatcgcattgcagttcacctttagctccaagtgctaatgaatttcttcatttttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8641 gcctcatcgcattgcagttcacctttagctccaagtgctaatgaatttcttcatttttct 8700
Query: 121 tttttttttagcgcctgttatgcgtgtctcttgatccgtctctaagcagtgagaaggatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8701 tttttttttagcgcctgttatgcgtgtctcttgatccgtctctaagcagtgagaaggatc 8760
Query: 181 caaccattgggtagtagtttgaataagtcagtcaggtgtttgataaacttctttactggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8761 caaccattgggtagtagtttgaataagtcagtcaggtgtttgataaacttctttactggt 8820
Query: 241 caattttcaatacaaactagatcttagttaagcatttgtaaataaggcagctaagctgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8821 caattttcaatacaaactagatcttagttaagcatttgtaaataaggcagctaagctgct 8880
Query: 301 taaagtgaatgtttttctgatagttttcactgcatagtgcggggactcacaaagtgaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8881 taaagtgaatgtttttctgatagttttcactgcatagtgcggggactcacaaagtgaaaa 8940
Query: 361 caaaaattaactactgggtagtaaactgacgtgtggttgcagataacgattgaacgatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8941 caaaaattaactactgggtagtaaactgacgtgtggttgcagataacgattgaacgatgg 9000
Query: 421 ttatgaccgttatccagtctgaaccgtctcctcagtatacaatccacattctgataagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9001 ttatgaccgttatccagtctgaaccgtctcctcagtatacaatccacattctgataagag 9060
Query: 481 ataatcatgaagagaaagggcgcatcctcactatcttttcctggagaggtgttcctttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9061 ataatcatgaagagaaagggcgcatcctcactatcttttcctggagaggtgttcctttca 9120
Query: 541 tgttttttttttgtttttaccctggaagaatgactttttactacgttgatttctgtgttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9121 tgttttttttttgtttttaccctggaagaatgactttttactacgttgatttctgtgttc 9180
Query: 601 gaggtgcggccatccccgtgtctgagaattcaagatgtctatcggcgcttgatgataaac 660
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9181 gaggtgcggccatccccgtgtctgagaattcaagatgtctatcggc-cttgatgataaac 9239
Query: 661 atattcgacatgagacctatggcagacgtaaatgtgcacaactttgcaagtgtagggaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240 atattcgacatgagacctatggcagacgtaaatgtgcacaactttgcaagtgtagggaaa 9299
Query: 721 gctcttgattaaataaagatatttacatgaaagttaagcgaagtgaagtwatttgacaga 780
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 9300 gctcttgattaaataaagatatttacatgaaagttaagcgaagtgaagtaatttgacaga 9359
Query: 781 aggkgtttgtcttgttgttattcttattctttgatgttggaatagatctgcgtaacatcg 840
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9360 aggtgtttgtcttgttgttattcttattctttgatgttggaatagatctgcgtaacatcg 9419
Query: 841 tcgatttcttctaattgattkatgaatttctctagctttgcatgt 885
|||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9420 tcgatttcttctaattgattgatgaatttctctagctttgcatgt 9464
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9530
Number of Sequences: 1807
Number of extensions: 9530
Number of successful extensions: 177
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)